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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
71030

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human RAPH1 HGNC:14436 (HGNC)
65059 (Entrez Gene)
609035 (OMIM)
RAPH1 (MyGene.info)
HGNC homology
Chr2 q33.2 Chr2:203433682-203535335 (-)
GRCh38.p7
Q70E73 (UniProt | EBI)
NM_213589 (RefSeq)
mouse Raph1 MGI:1924550 (MGI)
77300 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr1 30.48 cM Chr1:60482292-60567104 (-)
GRCm38
OTTMUSG00000002211 (VEGA)
OTTMUSP00000002151 (VEGA)
OTTMUST00000004475 (VEGA)
rat Raph1 363239 (Entrez Gene)
Chr9 q32 NP_001102268 (RefSeq)
NM_001108798 (RefSeq)
chimpanzee RAPH1 459893 (Entrez Gene)
Chr2B XP_016805842 (RefSeq)
cattle RAPH1 523153 (Entrez Gene)
Chr2 XP_024837120 (RefSeq)
dog RAPH1 488486 (Entrez Gene)
Chr37 XP_013966384 (RefSeq)
chicken RAPH1 424107 (Entrez Gene)
Chr7 XP_025008167 (RefSeq)
zebrafish raph1a 557435 (Entrez Gene)
Chr9 XP_005167565 (RefSeq)
raph1b 560319 (Entrez Gene)
Chr1 NP_001121716 (RefSeq)
NM_001128244 (RefSeq)
macaque, rhesus RAPH1 705065 (Entrez Gene)
Chr12 XP_014966232 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/11/2018
MGI 6.12
The Jackson Laboratory