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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
69487

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human GSDMC HGNC:7151 (HGNC)
56169 (Entrez Gene)
608384 (OMIM)
HGNC homology
Chr8 q24.21 Chr8:129705903-129786888 (-)
GRCh38.p7
Q9BYG8 (UniProt | EBI)
NM_031415 (RefSeq)
mouse Gsdmc MGI:1933176 (MGI)
83492 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr15 27.79 cM Chr15:63775971-63808739 (-)
GRCm38
83492 (NCBI Gene Model)
Q99NB5 (UniProt | EBI)
NM_031378 (RefSeq)
Gsdmc2 MGI:2146102 (MGI)
331063 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr15 27.91 cM Chr15:63824346-63845177 (-)
GRCm38
ENSMUSG00000056293 (Ensembl Gene Model)
ENSMUSP00000141066 (Ensembl)
ENSMUST00000188404 (Ensembl)
Gsdmc3 MGI:3580656 (MGI)
270328 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr15 27.99 cM Chr15:63857724-63878558 (-)
GRCm38
ENSMUSG00000055827 (Ensembl Gene Model)
ENSMUSP00000140272 (Ensembl)
ENSMUST00000185526 (Ensembl)
Gsdmc4 MGI:1921798 (MGI)
74548 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr15 28.07 cM Chr15:63891264-63912297 (-)
GRCm38
ENSMUSG00000055748 (Ensembl Gene Model)
ENSMUSP00000140269 (Ensembl)
ENSMUST00000188108 (Ensembl)
rat Gsdmc 299908 (Entrez Gene)
Chr7 q33 P85967 (UniProt | EBI)
NM_001134495 (RefSeq)
chimpanzee GSDMC 741746 (Entrez Gene)
Chr8 XP_001153860 (RefSeq)
cattle GSDMC 508492 (Entrez Gene)
Chr14 NP_001039469 (RefSeq)
NM_001046004 (RefSeq)
dog GSDMC 609825 (Entrez Gene)
Chr13 XP_022282826 (RefSeq)
macaque, rhesus GSDMC 695343 (Entrez Gene)
Chr8 XP_028708741 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
01/07/2020
MGI 6.14
The Jackson Laboratory