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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 67, Dec 12, 2012)
69293

 
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human AGPAT4 HGNC:20885 (HGNC)
56895 (Entrez Gene)
614795 (OMIM)
Chr6 q26 Chr6:161130025-161274075 (-)
GRCh38
Q9NRZ5 (UniProt | EBI)
NM_020133 (RefSeq)
mouse Agpat4 MGI:1915512 (MGI)
68262 (Entrez Gene)
Gene Tree
VISTA-Point
Chr17 8.33 cM Chr17:12118704-12219645 (+)
GRCm38
OTTMUSG00000036581 (VEGA)
OTTMUSP00000052122 (VEGA)
OTTMUST00000093805 (VEGA)
rat Agpat4 170919 (Entrez Gene)
Chr1 q11 Q924S1 (UniProt | EBI)
NM_133406 (RefSeq)
chimpanzee AGPAT4 741254 (Entrez Gene)
Chr6 XP_001153359 (RefSeq)
cattle AGPAT4 507456 (Entrez Gene)
Chr9 Q5E9R2 (UniProt | EBI)
NM_001015537 (RefSeq)
dog AGPAT4 612306 (Entrez Gene)
Chr1 XP_855143 (RefSeq)
chicken AGPAT4 421578 (Entrez Gene)
Chr3 XP_419616 (RefSeq)
zebrafish agpat4 406265 (Entrez Gene)
Chr13 NP_998157 (RefSeq)
NM_212992 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory