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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CNTNAP2 HGNC:13830 (HGNC)
26047 (Entrez Gene)
604569 (OMIM)
CNTNAP2 (MyGene.info)
HGNC homology
Chr7 q35-q36.1 Chr7:146116035-148420998 (+)
autistic disorder
cortical dysplasia-focal epilepsy syndrome
Q9UHC6 (UniProt | EBI)
NM_014141 (RefSeq)
mouse Cntnap2 MGI:1914047 (MGI)
66797 (Entrez Gene)
Gene Tree
HGNC homology
Chr6 21.81 cM Chr6:45059357-47304213 (+)
autistic disorder
cortical dysplasia-focal epilepsy syndrome
OTTMUSG00000022414 (VEGA)
OTTMUSP00000025482 (VEGA)
OTTMUST00000053586 (VEGA)
rat Cntnap2 500105 (Entrez Gene)
Chr4 q24 XP_008761152 (RefSeq)
chimpanzee CNTNAP2 463819 (Entrez Gene)
Chr7 XP_016814354 (RefSeq)
cattle CNTNAP2 100337375 (Entrez Gene)
Chr4 XP_015326271 (RefSeq)
dog CNTNAP2 100687859 (Entrez Gene)
Chr16 XP_003432128 (RefSeq)
chicken CNTNAP2 768456 (Entrez Gene)
Chr2 XP_015131476 (RefSeq)
zebrafish cntnap2a 559157 (Entrez Gene)
Chr24 NP_001268920 (RefSeq)
NM_001281991 (RefSeq)
frog, western clawed cntnap2 780189 (Entrez Gene)
Chr6 NP_001072732 (RefSeq)
NM_001079264 (RefSeq)
macaque, rhesus CNTNAP2 574172 (Entrez Gene)
Chr3 XP_001094652 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.12
The Jackson Laboratory