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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
69132

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human VPS4A HGNC:13488 (HGNC)
27183 (Entrez Gene)
609982 (OMIM)
VPS4A (MyGene.info)
HGNC homology
Chr16 q22.1 Chr16:69311384-69325043 (+)
GRCh38.p7
Q9UN37 (UniProt | EBI)
NM_013245 (RefSeq)
mouse Vps4a MGI:1890520 (MGI)
116733 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr8 53.53 cM Chr8:107031326-107045756 (+)
GRCm38
116733 (NCBI Gene Model)
Q8VEJ9 (UniProt | EBI)
NM_126165 (RefSeq)
rat Vps4a 246772 (Entrez Gene)
Chr19 q12 Q793F9 (UniProt | EBI)
NM_145678 (RefSeq)
chimpanzee VPS4A 743569 (Entrez Gene)
Chr16 XP_016785562 (RefSeq)
dog VPS4A 479674 (Entrez Gene)
Chr5 XP_005620829 (RefSeq)
chicken VPS4A 425637 (Entrez Gene)
Chr11 XP_015148165 (RefSeq)
zebrafish vps4a 767670 (Entrez Gene)
Chr25 NP_001070077 (RefSeq)
NM_001076609 (RefSeq)
frog, western clawed vps4a 100158600 (Entrez Gene)
Chr4 XP_002943933 (RefSeq)
macaque, rhesus VPS4A 705277 (Entrez Gene)
Chr20 NP_001253930 (RefSeq)
NM_001267001 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/04/2018
MGI 6.13
The Jackson Laboratory