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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
69032

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PIP5K1C HGNC:8996 (HGNC)
23396 (Entrez Gene)
606102 (OMIM)
Chr19 p13.3 Chr19:3630181-3700486 (-)
GRCh38
Lethal Congenital Contracture Syndrome 3; LCCS3
O60331 (UniProt | EBI)
NM_012398 (RefSeq)
mouse Pip5k1c MGI:1298224 (MGI)
18717 (Entrez Gene)
Gene Tree
VISTA-Point
Chr10 39.72 cM Chr10:81292963-81319973 (+)
GRCm38
OTTMUSG00000033475 (VEGA)
OTTMUSP00000045293 (VEGA)
OTTMUST00000084129 (VEGA)
rat Pip5k1c 314641 (Entrez Gene)
Chr7 q11 Q5I6B8 (UniProt | EBI)
NM_001009967 (RefSeq)
chimpanzee PIP5K1C 455590 (Entrez Gene)
Chr19 XP_009432651 (RefSeq)
rhesus macaque LOC721744 721744 (Entrez Gene)
Chr19 XP_002801072 (RefSeq)
cattle PIP5K1C 508819 (Entrez Gene)
Chr7 NP_001192574 (RefSeq)
NM_001205645 (RefSeq)
dog PIP5K1C 485054 (Entrez Gene)
Chr20 XP_542172 (RefSeq)
chicken PIP5K1C 420072 (Entrez Gene)
Chr28 XP_418191 (RefSeq)
western clawed frog pip5k1c 100145583 (Entrez Gene)
ChrUN NP_001120474 (RefSeq)
NM_001127002 (RefSeq)
zebrafish pip5k1cb 100536224 (Entrez Gene)
Chr2 XP_005163702 (RefSeq)
si:ch211-243a15.1 100005033 (Entrez Gene)
Chr2 XP_005171520 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory