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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human RPF1 HGNC:30350 (HGNC)
80135 (Entrez Gene)
HGNC homology
Chr1 p22.3 Chr1:84479237-84498350 (+)
Q9H9Y2 (UniProt | EBI)
NM_025065 (RefSeq)
mouse Rpf1 MGI:1917535 (MGI)
70285 (Entrez Gene)
Gene Tree
HGNC homology
Chr3 71.57 cM Chr3:146506344-146521423 (-)
70285 (NCBI Gene Model)
Q7TND5 (UniProt | EBI)
NM_027332 (RefSeq)
rat Rpf1 499725 (Entrez Gene)
Chr2 q44 Q5RJS9 (UniProt | EBI)
NM_001100794 (RefSeq)
chimpanzee RPF1 469370 (Entrez Gene)
Chr1 XP_524755 (RefSeq)
cattle RPF1 513081 (Entrez Gene)
Chr3 NP_001076886 (RefSeq)
NM_001083417 (RefSeq)
dog RPF1 479972 (Entrez Gene)
Chr6 XP_537096 (RefSeq)
chicken RPF1 424539 (Entrez Gene)
Chr8 XP_422376 (RefSeq)
zebrafish rpf1 415250 (Entrez Gene)
Chr11 Q6IQU6 (UniProt | EBI)
NM_001002160 (RefSeq)
frog, western clawed rpf1 100328984 (Entrez Gene)
Chr4 NP_001165011 (RefSeq)
NM_001171540 (RefSeq)
macaque, rhesus RPF1 710286 (Entrez Gene)
Chr1 NP_001248500 (RefSeq)
NM_001261571 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
MGI 6.15
The Jackson Laboratory