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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
68536

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human IFNA4 HGNC:5425 (HGNC)
3441 (Entrez Gene)
147564 (OMIM)
IFNA4 (MyGene.info)
HGNC homology
Chr9 p21.3 Chr9:21186618-21187599 (-)
GRCh38.p7
P05014 (UniProt | EBI)
NM_021068 (RefSeq)
mouse Ifna1 MGI:107668 (MGI)
15962 (Entrez Gene)
Gene Tree
VISTA-Point
Chr4 42.04 cM Chr4:88850087-88850656 (+)
GRCm38
15962 (NCBI Gene Model)
P01572 (UniProt | EBI)
NM_010502 (RefSeq)
Ifna2 MGI:107666 (MGI)
15965 (Entrez Gene)
Gene Tree
VISTA-Point
Chr4 42.02 cM Chr4:88683207-88683779 (-)
GRCm38
15965 (NCBI Gene Model)
P01573 (UniProt | EBI)
NM_010503 (RefSeq)
Ifna5 MGI:107663 (MGI)
15968 (Entrez Gene)
Gene Tree
VISTA-Point
Chr4 42.03 cM Chr4:88835525-88836094 (+)
GRCm38
15968 (NCBI Gene Model)
P07349 (UniProt | EBI)
NM_010505 (RefSeq)
Ifna6 MGI:107662 (MGI)
15969 (Entrez Gene)
Gene Tree
VISTA-Point
Chr4 42.03 cM Chr4:88827416-88827985 (+)
GRCm38
ENSMUSG00000101252 (Ensembl Gene Model)
ENSMUSP00000100777 (Ensembl)
ENSMUST00000105146 (Ensembl)
Ifna7 MGI:107661 (MGI)
15970 (Entrez Gene)
Gene Tree
VISTA-Point
Chr4 42.03 cM Chr4:88816228-88816800 (+)
GRCm38
ENSMUSG00000100713 (Ensembl Gene Model)
ENSMUSP00000100774 (Ensembl)
ENSMUST00000105143 (Ensembl)
Ifna9 MGI:107659 (MGI)
15972 (Entrez Gene)
Gene Tree
VISTA-Point
Chr4 42.01 cM Chr4:88591813-88592385 (-)
GRCm38
15972 (NCBI Gene Model)
P09235 (UniProt | EBI)
NM_010507 (RefSeq)
Ifna11 MGI:109210 (MGI)
15964 (Entrez Gene)
Gene Tree
VISTA-Point
Chr4 42.03 cM Chr4:88819959-88820531 (+)
GRCm38
ENSMUSG00000100549 (Ensembl Gene Model)
ENSMUSP00000127921 (Ensembl)
ENSMUST00000170428 (Ensembl)
Ifna12 MGI:2676324 (MGI)
242519 (Entrez Gene)
Gene Tree
VISTA-Point
Chr4 42.01 cM Chr4:88602580-88603376 (-)
GRCm38
242519 (NCBI Gene Model)
Q80SS5 (UniProt | EBI)
NM_177361 (RefSeq)
Ifna13 MGI:2667155 (MGI)
230396 (Entrez Gene)
Gene Tree
VISTA-Point
Chr4 42.02 cM Chr4:88643641-88644459 (-)
GRCm38
230396 (NCBI Gene Model)
Q80SU4 (UniProt | EBI)
NM_177347 (RefSeq)
Ifna14 MGI:3641425 (MGI)
404549 (Entrez Gene)
Gene Tree
VISTA-Point
Chr4 41.98 cM Chr4:88571229-88571798 (-)
GRCm38
404549 (NCBI Gene Model)
NP_996858 (RefSeq)
NM_206975 (RefSeq)
Ifna15 MGI:3649418 (MGI)
242517 (Entrez Gene)
Gene Tree
VISTA-Point
Chr4 41.96 cM Chr4:88557673-88558245 (-)
GRCm38
242517 (NCBI Gene Model)
NP_996753 (RefSeq)
NM_206870 (RefSeq)
Ifna16 MGI:3649260 (MGI)
230398 (Entrez Gene)
Gene Tree
VISTA-Point
Chr4 42.02 cM Chr4:88676287-88676856 (-)
GRCm38
230398 (NCBI Gene Model)
NP_996750 (RefSeq)
NM_206867 (RefSeq)
Ifnab MGI:1097683 (MGI)
15974 (Entrez Gene)
Gene Tree
VISTA-Point
Chr4 42.02 cM Chr4:88690599-88691268 (-)
GRCm38
15974 (NCBI Gene Model)
NP_032362 (RefSeq)
NM_008336 (RefSeq)
rat Ifna1 298210 (Entrez Gene)
Chr5 q32 P05011 (UniProt | EBI)
NM_001014786 (RefSeq)
Ifna2 298213 (Entrez Gene)
Chr5 q32 NP_001258147 (RefSeq)
NM_001271218 (RefSeq)
Ifna4 298205 (Entrez Gene)
Chr5 q32 NP_001100137 (RefSeq)
NM_001106667 (RefSeq)
Ifna11 298211 (Entrez Gene)
Chr5 q32 XP_233150 (RefSeq)
Ifna16l1 500491 (Entrez Gene)
Chr5 q32 XP_575856 (RefSeq)
LOC100912314 100912314 (Entrez Gene)
Chr5 XP_017458423 (RefSeq)
LOC100912356 100912356 (Entrez Gene)
Chr5 XP_003750023 (RefSeq)
RGD1559679 502961 (Entrez Gene)
Chr5 q32 XP_578466 (RefSeq)
RGD1564897 502962 (Entrez Gene)
Chr5 q32 XP_017443979 (RefSeq)
chimpanzee LOC741660 741660 (Entrez Gene)
Chr9 XP_001151758 (RefSeq)
macaque, rhesus IFNA10 710654 (Entrez Gene)
Chr15 NP_001181313 (RefSeq)
NM_001194384 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
11/05/2019
MGI 6.14
The Jackson Laboratory