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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
685

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human ITGB6 HGNC:6161 (HGNC)
3694 (Entrez Gene)
147558 (OMIM)
Chr2 q24.2 Chr2:160099666-160200313 (-)
GRCh38
P18564 (UniProt | EBI)
NM_000888 (RefSeq)
mouse Itgb6 MGI:96615 (MGI)
16420 (Entrez Gene)
Gene Tree
VISTA-Point
Chr2 34.81 cM Chr2:60598292-60722643 (-)
GRCm38
Asthma, Susceptibility to
Emphysema, Hereditary Pulmonary
OTTMUSG00000012790 (VEGA)
OTTMUSP00000013830 (VEGA)
OTTMUST00000030865 (VEGA)
rat Itgb6 311061 (Entrez Gene)
Chr3 q21 Q6AYF4 (UniProt | EBI)
NM_001004263 (RefSeq)
chimpanzee ITGB6 459683 (Entrez Gene)
Chr2B XP_001148792 (RefSeq)
rhesus macaque ITGB6 700454 (Entrez Gene)
Chr12 XP_001094740 (RefSeq)
cattle ITGB6 282644 (Entrez Gene)
Chr2 Q8SQB8 (UniProt | EBI)
NM_174698 (RefSeq)
dog ITGB6 488368 (Entrez Gene)
Chr36 XP_857148 (RefSeq)
chicken ITGB6 424191 (Entrez Gene)
Chr7 XP_422037 (RefSeq)
western clawed frog itgb6 100037861 (Entrez Gene)
ChrUN NP_001090775 (RefSeq)
NM_001097306 (RefSeq)
zebrafish itgb6 100499533 (Entrez Gene)
Chr11 XP_003199474 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory