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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
685

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human ITGB6 HGNC:6161 (HGNC)
3694 (Entrez Gene)
147558 (OMIM)
HGNC homology
Chr2 q24.2 Chr2:160099666-160200313 (-)
GRCh38.p2
Amelogenesis Imperfecta, Type IH; AI1H
P18564 (UniProt | EBI)
NM_001282353 (RefSeq)
mouse Itgb6 MGI:96615 (MGI)
16420 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr2 34.81 cM Chr2:60598292-60722643 (-)
GRCm38
Asthma, Susceptibility to
Emphysema, Hereditary Pulmonary
OTTMUSG00000012790 (VEGA)
OTTMUSP00000013748 (VEGA)
OTTMUST00000030629 (VEGA)
rat Itgb6 311061 (Entrez Gene)
Chr3 q21 Q6AYF4 (UniProt | EBI)
NM_001004263 (RefSeq)
chimpanzee LOC459683 459683 (Entrez Gene)
Chr2B XP_016805428 (RefSeq)
cattle ITGB6 282644 (Entrez Gene)
Chr2 Q8SQB8 (UniProt | EBI)
NM_174698 (RefSeq)
dog ITGB6 488368 (Entrez Gene)
Chr36 XP_005640288 (RefSeq)
chicken ITGB6 424191 (Entrez Gene)
Chr7 XP_015145198 (RefSeq)
zebrafish itgb6 100499533 (Entrez Gene)
Chr11 XP_003199474 (RefSeq)
frog, western clawed itgb6 100037861 (Entrez Gene)
Chr9 NP_001090775 (RefSeq)
NM_001097306 (RefSeq)
macaque, rhesus ITGB6 700454 (Entrez Gene)
Chr12 XP_014965718 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/29/2016
MGI 6.06
The Jackson Laboratory