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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
68449

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human GATA6 HGNC:4174 (HGNC)
2627 (Entrez Gene)
601656 (OMIM)
Chr18 q11.1-q11.2 Chr18:22169443-22202528 (+)
GRCh38
Atrial Septal Defect 9; ASD9
Atrioventricular Septal Defect 5; AVSD5
Conotruncal Heart Malformations; CTHM
Heart Defects, Congenital, and Other Congenital Anomalies; HDCA
Tetralogy of Fallot; TOF
Q92908 (UniProt | EBI)
NM_005257 (RefSeq)
mouse Gata6 MGI:107516 (MGI)
14465 (Entrez Gene)
Gene Tree
VISTA-Point
Chr18 5.63 cM Chr18:11052510-11085635 (+)
GRCm38
ENSMUSG00000005836 (Ensembl Gene Model)
ENSMUSP00000041774 (Ensembl)
ENSMUST00000047762 (Ensembl)
rat Gata6 29300 (Entrez Gene)
Chr18 p13 P46153 (UniProt | EBI)
NM_019185 (RefSeq)
chimpanzee GATA6 468495 (Entrez Gene)
Chr18 XP_009432061 (RefSeq)
rhesus macaque GATA6 699591 (Entrez Gene)
Chr18 XP_002800933 (RefSeq)
dog GATA6 490520 (Entrez Gene)
Chr7 XP_005623196 (RefSeq)
western clawed frog gata6 395062 (Entrez Gene)
ChrUN NP_989422 (RefSeq)
NM_204091 (RefSeq)
zebrafish gata6 58076 (Entrez Gene)
Chr2|14 NP_571632 (RefSeq)
NM_131557 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory