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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
68392

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CLGN HGNC:2060 (HGNC)
1047 (Entrez Gene)
601858 (OMIM)
Calmegin (MyGene.info)
HGNC homology
Chr4 q31.1 Chr4:140388453-140427661 (-)
GRCh38.p7
O14967 (UniProt | EBI)
NM_001130675 (RefSeq)
mouse Clgn MGI:107472 (MGI)
12745 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr8 39.97 cM Chr8:83389867-83428552 (+)
GRCm38
ENSMUSG00000002190 (Ensembl Gene Model)
ENSMUSP00000002259 (Ensembl)
ENSMUST00000002259 (Ensembl)
rat Clgn 685504 (Entrez Gene)
Chr19 q11 NP_001102942 (RefSeq)
NM_001109472 (RefSeq)
chimpanzee CLGN 461501 (Entrez Gene)
Chr4 NP_001267312 (RefSeq)
NM_001280383 (RefSeq)
cattle CLGN 504256 (Entrez Gene)
Chr17 Q3SYT6 (UniProt | EBI)
NM_001034205 (RefSeq)
dog CLGN 476076 (Entrez Gene)
Chr19 E2RA18 (UniProt | EBI)
NM_001313774 (RefSeq)
chicken CLGN 422447 (Entrez Gene)
Chr4 XP_025006186 (RefSeq)
zebrafish clgn 556495 (Entrez Gene)
Chr1 NP_001071009 (RefSeq)
NM_001077541 (RefSeq)
frog, western clawed clgn 100494636 (Entrez Gene)
Chr1 XP_004911183 (RefSeq)
macaque, rhesus CLGN 698361 (Entrez Gene)
Chr5 XP_001089882 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory