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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
68387

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human ALK HGNC:427 (HGNC)
238 (Entrez Gene)
105590 (OMIM)
Chr2 p23 Chr2:29192774-29921611 (-)
GRCh38
Neuroblastoma, Susceptibility to, 3; NBLST3
Q9UM73 (UniProt | EBI)
NM_004304 (RefSeq)
mouse Alk MGI:103305 (MGI)
11682 (Entrez Gene)
Gene Tree
VISTA-Point
Chr17 43.77 cM Chr17:71869442-72603709 (-)
GRCm38
ENSMUSG00000055471 (Ensembl Gene Model)
ENSMUSP00000083840 (Ensembl)
ENSMUST00000086639 (Ensembl)
rat Alk 266802 (Entrez Gene)
Chr6 q13 NP_001162572 (RefSeq)
NM_001169101 (RefSeq)
chimpanzee ALK 459127 (Entrez Gene)
Chr2A XP_003309006 (RefSeq)
cattle LOC536642 536642 (Entrez Gene)
Chr11 XP_616782 (RefSeq)
dog ALK 483021 (Entrez Gene)
Chr17 XP_540136 (RefSeq)
chicken ALK 421297 (Entrez Gene)
Chr3 XP_419364 (RefSeq)
western clawed frog LOC100495071 100495071 (Entrez Gene)
ChrUN XP_002938468 (RefSeq)
zebrafish alk 563509 (Entrez Gene)
Chr17 XP_691964 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory