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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
68300

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SPINK1 HGNC:11244 (HGNC)
6690 (Entrez Gene)
167790 (OMIM)
Chr5 q32 Chr5:147824580-147839231 (-)
GRCh38
Pancreatitis, Hereditary; PCTT
Tropical Calcific Pancreatitis
P00995 (UniProt | EBI)
NM_003122 (RefSeq)
mouse Spink3 MGI:106202 (MGI)
20730 (Entrez Gene)
Gene Tree
VISTA-Point
Chr18 23.47 cM Chr18:43728069-43737237 (-)
GRCm38
20730 (NCBI Gene Model)
P09036 (UniProt | EBI)
NM_009258 (RefSeq)
chimpanzee SPINK1 740785 (Entrez Gene)
Chr5 XP_009448184 (RefSeq)
rhesus macaque SPINK1 708951 (Entrez Gene)
Chr6 XP_001102888 (RefSeq)
cattle SPINK1 574092 (Entrez Gene)
Chr7 P00996 (UniProt | EBI)
NM_001025348 (RefSeq)
dog SPINK1 608433 (Entrez Gene)
Chr2 XP_850557 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory