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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
68295

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SLC22A5 HGNC:10969 (HGNC)
6584 (Entrez Gene)
603377 (OMIM)
Chr5 q23.3 Chr5:132369704-132395614 (+)
GRCh38
Carnitine Deficiency, Systemic Primary; CDSP
O76082 (UniProt | EBI)
NM_003060 (RefSeq)
mouse Slc22a5 MGI:1329012 (MGI)
20520 (Entrez Gene)
Gene Tree
VISTA-Point
Chr11 32.02 cM Chr11:53864542-53891660 (-)
GRCm38
Carnitine Deficiency, Systemic Primary; CDSP
OTTMUSG00000005649 (VEGA)
OTTMUSP00000005825 (VEGA)
OTTMUST00000012569 (VEGA)
rat Slc22a5 29726 (Entrez Gene)
Chr10 q22 O70594 (UniProt | EBI)
NM_019269 (RefSeq)
chimpanzee SLC22A5 462049 (Entrez Gene)
Chr5 XP_003310855 (RefSeq)
rhesus macaque SLC22A5 707590 (Entrez Gene)
Chr6 XP_001103789 (RefSeq)
cattle SLC22A5 541266 (Entrez Gene)
Chr7 NP_001039967 (RefSeq)
NM_001046502 (RefSeq)
dog SLC22A5 608146 (Entrez Gene)
Chr11 XP_860734 (RefSeq)
western clawed frog LOC101731319 101731319 (Entrez Gene)
ChrUN XP_004920385 (RefSeq)
slc22a4 394948 (Entrez Gene)
ChrUN NP_989323 (RefSeq)
NM_203992 (RefSeq)
slc22a5 100486941 (Entrez Gene)
ChrUN XP_002934410 (RefSeq)
zebrafish slc22a4 393822 (Entrez Gene)
Chr21 NP_957143 (RefSeq)
NM_200849 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory