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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
68273

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PPP6C HGNC:9323 (HGNC)
5537 (Entrez Gene)
612725 (OMIM)
Chr9 q33.3 Chr9:125146573-125189939 (-)
GRCh38
O00743 (UniProt | EBI)
NM_002721 (RefSeq)
mouse Ppp6c MGI:1915107 (MGI)
67857 (Entrez Gene)
Gene Tree
VISTA-Point
Chr2 24.44 cM Chr2:39194354-39226451 (-)
GRCm38
OTTMUSG00000012451 (VEGA)
OTTMUSP00000013324 (VEGA)
OTTMUST00000029606 (VEGA)
rat Ppp6c 171121 (Entrez Gene)
Chr3 q11 Q64620 (UniProt | EBI)
NM_133589 (RefSeq)
chimpanzee PPP6C 738446 (Entrez Gene)
Chr9 XP_001139308 (RefSeq)
cattle PPP6C 511058 (Entrez Gene)
Chr11 NP_001124222 (RefSeq)
NM_001130750 (RefSeq)
dog PPP6C 608922 (Entrez Gene)
Chr9 XP_851294 (RefSeq)
chicken PPP6C 772354 (Entrez Gene)
Chr17 NP_001073233 (RefSeq)
NM_001079765 (RefSeq)
western clawed frog ppp6c 549864 (Entrez Gene)
ChrUN NP_001017110 (RefSeq)
NM_001017110 (RefSeq)
zebrafish ppp6c 393980 (Entrez Gene)
Chr5 NP_957299 (RefSeq)
NM_201005 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory