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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human HAL HGNC:4806 (HGNC)
3034 (Entrez Gene)
609457 (OMIM)
HGNC homology
Chr12 q23.1 Chr12:95972662-95996365 (-)
P42357 (UniProt | EBI)
NM_001258334 (RefSeq)
mouse Hal MGI:96010 (MGI)
15109 (Entrez Gene)
Gene Tree
HGNC homology
Chr10 48.49 cM Chr10:93488768-93519304 (+)
OTTMUSG00000030965 (VEGA)
OTTMUSP00000040404 (VEGA)
OTTMUST00000076673 (VEGA)
rat Hal 29301 (Entrez Gene)
Chr7 q13 P21213 (UniProt | EBI)
NM_017159 (RefSeq)
chimpanzee HAL 452144 (Entrez Gene)
Chr12 XP_009424314 (RefSeq)
cattle HAL 615205 (Entrez Gene)
Chr5 A7YWP4 (UniProt | EBI)
NM_001105440 (RefSeq)
dog HAL 475433 (Entrez Gene)
Chr15 XP_532657 (RefSeq)
chicken HAL 378924 (Entrez Gene)
Chr1 NP_989735 (RefSeq)
NM_204404 (RefSeq)
zebrafish hal 100004331 (Entrez Gene)
Chr25 NP_001082926 (RefSeq)
NM_001089457 (RefSeq)
frog, western clawed hal.1 100145719 (Entrez Gene)
Chr3 NP_001120565 (RefSeq)
NM_001127093 (RefSeq)
macaque, rhesus HAL 712963 (Entrez Gene)
Chr11 XP_015007956 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.06
The Jackson Laboratory