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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 67, Dec 12, 2012)
68142

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human RAB5A HGNC:9783 (HGNC)
5868 (Entrez Gene)
179512 (OMIM)
Chr3 p24-p22 Chr3:19947080-19985175 (+)
GRCh38
P20339 (UniProt | EBI)
NM_004162 (RefSeq)
mouse Rab5a MGI:105926 (MGI)
271457 (Entrez Gene)
Gene Tree
VISTA-Point
Chr17 27.82 cM Chr17:53479234-53507671 (+)
GRCm38
ENSMUSG00000017831 (Ensembl Gene Model)
ENSMUSP00000017975 (Ensembl)
ENSMUST00000017975 (Ensembl)
rat Rab5a 64633 (Entrez Gene)
Chr9 q11 NP_073183 (RefSeq)
NM_022692 (RefSeq)
Rab5al1 100361891 (Entrez Gene)
Chr14 XP_003751425 (RefSeq)
chimpanzee RAB5A 460217 (Entrez Gene)
Chr3 XP_516319 (RefSeq)
rhesus macaque RAB5A 697712 (Entrez Gene)
Chr2 NP_001248077 (RefSeq)
NM_001261148 (RefSeq)
cattle RAB5A 539764 (Entrez Gene)
Chr1 Q0IIG7 (UniProt | EBI)
NM_001076186 (RefSeq)
chicken RAB5A 420649 (Entrez Gene)
Chr2 NP_001006363 (RefSeq)
NM_001006363 (RefSeq)
zebrafish rab5aa 337737 (Entrez Gene)
Chr19 NP_958893 (RefSeq)
NM_201485 (RefSeq)
rab5ab 393945 (Entrez Gene)
Chr16 NP_957264 (RefSeq)
NM_200970 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory