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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
68095

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human HPGD HGNC:5154 (HGNC)
3248 (Entrez Gene)
601688 (OMIM)
Chr4 q34-q35 Chr4:174490177-174522898 (-)
GRCh38
Digital Clubbing, Isolated Congenital
Hypertrophic Osteoarthropathy, Primary, Autosomal Recessive, 1; PHOAR1
P15428 (UniProt | EBI)
NM_000860 (RefSeq)
mouse Hpgd MGI:108085 (MGI)
15446 (Entrez Gene)
Gene Tree
VISTA-Point
Chr8 29.7 cM Chr8:56294552-56321046 (+)
GRCm38
Patent Ductus Arteriosus
15446 (NCBI Gene Model)
Q8VCC1 (UniProt | EBI)
NM_008278 (RefSeq)
rat Hpgd 79242 (Entrez Gene)
Chr16 p11 O08699 (UniProt | EBI)
NM_024390 (RefSeq)
chimpanzee HPGD 461613 (Entrez Gene)
Chr4 XP_517542 (RefSeq)
rhesus macaque HPGD 697864 (Entrez Gene)
Chr5 XP_001087957 (RefSeq)
cattle HPGD 512259 (Entrez Gene)
Chr8 Q3T0C2 (UniProt | EBI)
NM_001034419 (RefSeq)
dog HPGD 486073 (Entrez Gene)
Chr25 NP_001271406 (RefSeq)
NM_001284477 (RefSeq)
chicken HPGD 422567 (Entrez Gene)
Chr4 NP_001264713 (RefSeq)
NM_001277784 (RefSeq)
western clawed frog hpgd 493354 (Entrez Gene)
ChrUN NP_001007992 (RefSeq)
NM_001007991 (RefSeq)
zebrafish hpgd 565975 (Entrez Gene)
Chr1 XP_694331 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory