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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human OPN1LW HGNC:9936 (HGNC)
5956 (Entrez Gene)
300822 (OMIM)
OPN1LW (MyGene.info)
HGNC homology
ChrX q28 ChrX:154144224-154159032 (+)
blue cone monochromacy
red color blindness
P04000 (UniProt | EBI)
NM_020061 (RefSeq)
mouse Opn1mw MGI:1097692 (MGI)
14539 (Entrez Gene)
Gene Tree
HGNC homology
ChrX 37.76 cM ChrX:74127464-74150760 (+)
OTTMUSG00000017694 (VEGA)
OTTMUSP00000019681 (VEGA)
OTTMUST00000043833 (VEGA)
rat Opn1mw 89810 (Entrez Gene)
ChrX O35476 (UniProt | EBI)
NM_053548 (RefSeq)
chimpanzee OPN1LW 741998 (Entrez Gene)
ChrX XP_001144896 (RefSeq)
cattle OPN1LW 282293 (Entrez Gene)
ChrX Q9BGI7 (UniProt | EBI)
NM_174566 (RefSeq)
dog OPN1LW 403778 (Entrez Gene)
ChrX O18914 (UniProt | EBI)
NM_001197072 (RefSeq)
chicken OPN1LW 396421 (Entrez Gene)
ChrUN P22329 (UniProt | EBI)
NM_205440 (RefSeq)
zebrafish opn1lw1 30413 (Entrez Gene)
Chr11 Q9W6A7 (UniProt | EBI)
NM_001313715 (RefSeq)
opn1lw2 436716 (Entrez Gene)
Chr11 Q8AYN0 (UniProt | EBI)
NM_001002443 (RefSeq)
frog, western clawed opn1lw 100124917 (Entrez Gene)
Chr8 NP_001096331 (RefSeq)
NM_001102861 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.12
The Jackson Laboratory