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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
68042

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human LCAT HGNC:6522 (HGNC)
3931 (Entrez Gene)
606967 (OMIM)
Chr16 q22.1 Chr16:67939884-67944112 (-)
GRCh38
Fish-Eye Disease; FED
Lecithin:cholesterol Acyltransferase Deficiency
P04180 (UniProt | EBI)
NM_000229 (RefSeq)
mouse Lcat MGI:96755 (MGI)
16816 (Entrez Gene)
Gene Tree
VISTA-Point
Chr8 53.06 cM Chr8:105939551-105943382 (-)
GRCm38
Fish-Eye Disease; FED
Lecithin:cholesterol Acyltransferase Deficiency
OTTMUSG00000031021 (VEGA)
OTTMUSP00000040518 (VEGA)
OTTMUST00000076850 (VEGA)
rat Lcat 24530 (Entrez Gene)
Chr19 q12 P18424 (UniProt | EBI)
NM_017024 (RefSeq)
chimpanzee LCAT 743056 (Entrez Gene)
Chr16 XP_001166500 (RefSeq)
cattle LCAT 510960 (Entrez Gene)
Chr18 NP_001039534 (RefSeq)
NM_001046069 (RefSeq)
dog LCAT 479680 (Entrez Gene)
Chr5 XP_851673 (RefSeq)
chicken LCAT 396136 (Entrez Gene)
Chr11 P53760 (UniProt | EBI)
NM_001293094 (RefSeq)
zebrafish LOC793137 793137 (Entrez Gene)
Chr25 XP_001332828 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/23/2014
MGI 5.19
The Jackson Laboratory