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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 67, Dec 12, 2012)
673

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human HTR6 HGNC:5301 (HGNC)
3362 (Entrez Gene)
601109 (OMIM)
Chr1 p36-p35 Chr1:19665287-19680966 (+)
GRCh38
P50406 (UniProt | EBI)
NM_000871 (RefSeq)
mouse Htr6 MGI:1196627 (MGI)
15565 (Entrez Gene)
Gene Tree
VISTA-Point
Chr4 70.57 cM Chr4:139061108-139075570 (-)
GRCm38
OTTMUSG00000009899 (VEGA)
OTTMUSP00000010478 (VEGA)
OTTMUST00000022954 (VEGA)
chimpanzee HTR6 469199 (Entrez Gene)
Chr1 Q5IS65 (UniProt | EBI)
NM_001034092 (RefSeq)
rhesus macaque LOC716776 716776 (Entrez Gene)
Chr1 XP_001107724 (RefSeq)
cattle HTR6 512167 (Entrez Gene)
Chr2 NP_001192646 (RefSeq)
NM_001205717 (RefSeq)
dog HTR6 487402 (Entrez Gene)
Chr2 XP_544528 (RefSeq)
chicken HTR6 430019 (Entrez Gene)
Chr21 NP_001166911 (RefSeq)
NM_001173440 (RefSeq)
zebrafish LOC568269 568269 (Entrez Gene)
Chr23 XP_696681 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory