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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
6696

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SF3B1 HGNC:10768 (HGNC)
23451 (Entrez Gene)
605590 (OMIM)
Chr2 q33.1 Chr2:197391974-197435091 (-)
GRCh38
Myelodysplastic Syndrome; MDS
O75533 (UniProt | EBI)
NM_001005526 (RefSeq)
mouse Sf3b1 MGI:1932339 (MGI)
81898 (Entrez Gene)
Gene Tree
VISTA-Point
Chr1 27.98 cM Chr1:54985169-55027481 (-)
GRCm38
OTTMUSG00000046964 (VEGA)
OTTMUSP00000066983 (VEGA)
OTTMUST00000121704 (VEGA)
rat Sf3b1 84486 (Entrez Gene)
Chr9 q31 NP_445878 (RefSeq)
NM_053426 (RefSeq)
chimpanzee SF3B1 459850 (Entrez Gene)
Chr2B XP_516006 (RefSeq)
rhesus macaque SF3B1 697773 (Entrez Gene)
Chr12 NP_001252892 (RefSeq)
NM_001265963 (RefSeq)
cattle SF3B1 510177 (Entrez Gene)
Chr2 NP_001179923 (RefSeq)
NM_001192994 (RefSeq)
dog SF3B1 488456 (Entrez Gene)
Chr37 XP_545578 (RefSeq)
chicken SF3B1 424056 (Entrez Gene)
Chr7 XP_421912 (RefSeq)
western clawed frog sf3b1 100127558 (Entrez Gene)
ChrUN XP_002931569 (RefSeq)
zebrafish sf3b1 446117 (Entrez Gene)
Chr9 XP_684311 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/23/2014
MGI 5.19
The Jackson Laboratory