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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
66345

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human COL28A1 HGNC:22442 (HGNC)
340267 (Entrez Gene)
609996 (OMIM)
COL28A1 (MyGene.info)
HGNC homology
Chr7 p21.3 Chr7:7338543-7542062 (-)
GRCh38.p7
Q2UY09 (UniProt | EBI)
NM_001037763 (RefSeq)
mouse Col28a1 MGI:2685312 (MGI)
213945 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr6 3.44 cM Chr6:7997808-8192617 (-)
GRCm38
ENSMUSG00000068794 (Ensembl Gene Model)
ENSMUSP00000111199 (Ensembl)
ENSMUST00000115537 (Ensembl)
rat Col28a1 312115 (Entrez Gene)
Chr4 q21 XP_038964533 (RefSeq)
chimpanzee COL28A1 463262 (Entrez Gene)
Chr7 XP_016812567 (RefSeq)
dog COL28A1 482315 (Entrez Gene)
Chr14 XP_038412823 (RefSeq)
chicken COL28A1 420576 (Entrez Gene)
Chr2 XP_015137392 (RefSeq)
zebrafish col28a1a 555428 (Entrez Gene)
Chr19 NP_001334976 (RefSeq)
NM_001348047 (RefSeq)
frog, western clawed col28a1 100488728 (Entrez Gene)
Chr6 XP_031760315 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
04/06/2021
MGI 6.16
The Jackson Laboratory