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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
65333

 
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SLC15A5 HGNC:33455 (HGNC)
729025 (Entrez Gene)
HGNC homology
Chr12 p12.3 Chr12:16188485-16277685 (-)
GRCh38.p7
A6NIM6 (UniProt | EBI)
NM_001170798 (RefSeq)
mouse Slc15a5 MGI:3607714 (MGI)
277898 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr6 67.96 cM Chr6:137983586-138079916 (-)
GRCm38
277898 (NCBI Gene Model)
Q8CBB2 (UniProt | EBI)
NM_177787 (RefSeq)
rat Slc15a5 502918 (Entrez Gene)
Chr4 q44 NP_001178944 (RefSeq)
NM_001192015 (RefSeq)
chimpanzee SLC15A5 740538 (Entrez Gene)
Chr12 XP_001142606 (RefSeq)
cattle SLC15A5 100848145 (Entrez Gene)
Chr5 XP_003586157 (RefSeq)
dog SLC15A5 100683793 (Entrez Gene)
Chr27 XP_003433618 (RefSeq)
chicken SLC15A5 418177 (Entrez Gene)
Chr1 XP_416408 (RefSeq)
zebrafish si:ch211-190o6.3 799543 (Entrez Gene)
Chr25 XP_021326382 (RefSeq)
frog, western clawed slc15a5 101733983 (Entrez Gene)
ChrUN XP_004920821 (RefSeq)
macaque, rhesus SLC15A5 703009 (Entrez Gene)
Chr11 XP_001091323 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/09/2019
MGI 6.13
The Jackson Laboratory