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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
65275

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human RTTN HGNC:18654 (HGNC)
25914 (Entrez Gene)
610436 (OMIM)
Chr18 q22.2 Chr18:70003804-70205726 (-)
GRCh38
Polymicrogyria with Seizures; PMGYS
Q86VV8 (UniProt | EBI)
NM_173630 (RefSeq)
mouse Rttn MGI:2179288 (MGI)
246102 (Entrez Gene)
Gene Tree
VISTA-Point
Chr18 58.93 cM Chr18:88971790-89131013 (+)
GRCm38
ENSMUSG00000023066 (Ensembl Gene Model)
ENSMUSP00000023828 (Ensembl)
ENSMUST00000023828 (Ensembl)
rat Rttn 291377 (Entrez Gene)
Chr18 q13 NP_001163907 (RefSeq)
NM_001170436 (RefSeq)
chimpanzee RTTN 455466 (Entrez Gene)
Chr18 XP_512171 (RefSeq)
rhesus macaque RTTN 703989 (Entrez Gene)
Chr18 XP_001095442 (RefSeq)
cattle RTTN 615378 (Entrez Gene)
Chr24 NP_001193136 (RefSeq)
NM_001206207 (RefSeq)
dog RTTN 483940 (Entrez Gene)
Chr1 XP_541060 (RefSeq)
chicken RTTN 421023 (Entrez Gene)
Chr2 NP_001243472 (RefSeq)
NM_001256543 (RefSeq)
western clawed frog rttn 100379860 (Entrez Gene)
ChrUN XP_002939666 (RefSeq)
zebrafish rttn 100151439 (Entrez Gene)
Chr24 XP_001920443 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory