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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
65126

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PANK2 HGNC:15894 (HGNC)
80025 (Entrez Gene)
606157 (OMIM)
Chr20 p13 Chr20:3887610-3923891 (+)
GRCh38
Hypoprebetalipoproteinemia, Acanthocytosis, Retinitis Pigmentosa, and Pallidal Degeneration
Neurodegeneration with Brain Iron Accumulation 1; NBIA1
Q9BZ23 (UniProt | EBI)
NM_024960 (RefSeq)
mouse Pank2 MGI:1921700 (MGI)
74450 (Entrez Gene)
Gene Tree
VISTA-Point
Chr2 63.31 cM Chr2:131262495-131299188 (+)
GRCm38
OTTMUSG00000016043 (VEGA)
OTTMUSP00000017161 (VEGA)
OTTMUST00000038271 (VEGA)
rat Pank2 296167 (Entrez Gene)
Chr3 q36 NP_001099983 (RefSeq)
NM_001106513 (RefSeq)
chimpanzee LOC458070 458070 (Entrez Gene)
Chr20 XP_009435019 (RefSeq)
rhesus macaque LOC717639 717639 (Entrez Gene)
Chr10 XP_002808007 (RefSeq)
cattle PANK2 535933 (Entrez Gene)
Chr13 XP_003582989 (RefSeq)
dog PANK2 477168 (Entrez Gene)
Chr24 XP_005634878 (RefSeq)
chicken PANK2 422935 (Entrez Gene)
Chr4 XP_420873 (RefSeq)
western clawed frog pank2 100487302 (Entrez Gene)
ChrUN XP_002936415 (RefSeq)
zebrafish pank2 570866 (Entrez Gene)
Chr13 NP_001074075 (RefSeq)
NM_001080606 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory