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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human VTA1 HGNC:20954 (HGNC)
51534 (Entrez Gene)
610902 (OMIM)
VTA1 (MyGene.info)
HGNC homology
Chr6 q24.1-q24.2 Chr6:142147162-142220948 (+)
Q9NP79 (UniProt | EBI)
NM_001286372 (RefSeq)
mouse Vta1 MGI:1913451 (MGI)
66201 (Entrez Gene)
Gene Tree
HGNC homology
Chr10 5.5 cM Chr10:14654760-14705542 (-)
66201 (NCBI Gene Model)
Q9CR26 (UniProt | EBI)
NM_025418 (RefSeq)
rat Vta1 292640 (Entrez Gene)
Chr1 p13 NP_001020811 (RefSeq)
NM_001025640 (RefSeq)
chimpanzee VTA1 463033 (Entrez Gene)
Chr6 XP_518771 (RefSeq)
cattle VTA1 506430 (Entrez Gene)
Chr9 Q32L63 (UniProt | EBI)
NM_001038045 (RefSeq)
dog VTA1 612830 (Entrez Gene)
Chr1 XP_860959 (RefSeq)
chicken VTA1 421674 (Entrez Gene)
Chr3 XP_015139683 (RefSeq)
zebrafish vta1 406414 (Entrez Gene)
Chr20 NP_998305 (RefSeq)
NM_213140 (RefSeq)
frog, western clawed vta1 493470 (Entrez Gene)
Chr5 NP_001008108 (RefSeq)
NM_001008107 (RefSeq)
macaque, rhesus VTA1 701578 (Entrez Gene)
Chr4 NP_001248449 (RefSeq)
NM_001261520 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
MGI 6.15
The Jackson Laboratory