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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
6449

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human GFM1 HGNC:13780 (HGNC)
85476 (Entrez Gene)
606639 (OMIM)
Chr3 q25 Chr3:158644497-158692572 (+)
GRCh38
Combined Oxidative Phosphorylation Deficiency 1; COXPD1
Q96RP9 (UniProt | EBI)
NM_024996 (RefSeq)
mouse Gfm1 MGI:107339 (MGI)
28030 (Entrez Gene)
Gene Tree
VISTA-Point
Chr3 30.96 cM Chr3:67430096-67476529 (+)
GRCm38
OTTMUSG00000029074 (VEGA)
OTTMUSP00000037052 (VEGA)
OTTMUST00000072125 (VEGA)
rat Gfm1 114017 (Entrez Gene)
Chr2 q31 Q07803 (UniProt | EBI)
NM_053625 (RefSeq)
chimpanzee GFM1 460812 (Entrez Gene)
Chr3 NP_001266792 (RefSeq)
NM_001279863 (RefSeq)
rhesus macaque GFM1 706456 (Entrez Gene)
Chr2 NP_001248619 (RefSeq)
NM_001261690 (RefSeq)
cattle GFM1 513309 (Entrez Gene)
Chr1 NP_001193078 (RefSeq)
NM_001206149 (RefSeq)
dog GFM1 477128 (Entrez Gene)
Chr23 XP_534320 (RefSeq)
chicken GFM1 425018 (Entrez Gene)
Chr9 XP_001233639 (RefSeq)
NM_001006555 (RefSeq)
western clawed frog gfm1 100494046 (Entrez Gene)
ChrUN XP_002933285 (RefSeq)
zebrafish gfm1 561840 (Entrez Gene)
Chr15 Q08BB1 (UniProt | EBI)
NM_001079994 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory