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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CLCN1 HGNC:2019 (HGNC)
1180 (Entrez Gene)
118425 (OMIM)
CLCN1 (MyGene.info)
HGNC homology
Chr7 q34 Chr7:143316126-143352008 (+)
myotonia congenita
P35523 (UniProt | EBI)
NM_000083 (RefSeq)
mouse Clcn1 MGI:88417 (MGI)
12723 (Entrez Gene)
Gene Tree
HGNC homology
Chr6 20.57 cM Chr6:42286685-42315756 (+)
myotonia congenita
OTTMUSG00000036880 (VEGA)
OTTMUSP00000052750 (VEGA)
OTTMUST00000094738 (VEGA)
rat Clcn1 25688 (Entrez Gene)
Chr4 q24 P35524 (UniProt | EBI)
NM_013147 (RefSeq)
chimpanzee CLCN1 472560 (Entrez Gene)
Chr7 XP_016800915 (RefSeq)
cattle CLCN1 514597 (Entrez Gene)
Chr4 NP_001137343 (RefSeq)
NM_001143871 (RefSeq)
dog CLCN1 403723 (Entrez Gene)
Chr16 Q9MZT1 (UniProt | EBI)
NM_001003124 (RefSeq)
chicken CLCN1 427949 (Entrez Gene)
Chr1 XP_015149516 (RefSeq)
zebrafish clcn1a 795133 (Entrez Gene)
Chr19 NP_001076379 (RefSeq)
NM_001082910 (RefSeq)
clcn1b 567478 (Entrez Gene)
Chr16 XP_017206972 (RefSeq)
macaque, rhesus LOC703944 703944 (Entrez Gene)
Chr3 XP_014990614 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.12
The Jackson Laboratory