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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
629

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human GABRA1 HGNC:4075 (HGNC)
2554 (Entrez Gene)
137160 (OMIM)
Chr5 q34 Chr5:161847191-161899959 (+)
GRCh38
Epilepsy, Idiopathic Generalized, Susceptibility to, 13; EIG13
Epileptic Encephalopathy, Early Infantile, 19; EIEE19
P14867 (UniProt | EBI)
NM_000806 (RefSeq)
mouse Gabra1 MGI:95613 (MGI)
14394 (Entrez Gene)
Gene Tree
VISTA-Point
Chr11 24.97 cM Chr11:42130939-42182930 (-)
GRCm38
Epilepsy, Idiopathic Generalized, Susceptibility to, 13; EIG13
OTTMUSG00000005445 (VEGA)
OTTMUSP00000005606 (VEGA)
OTTMUST00000012129 (VEGA)
rat Gabra1 29705 (Entrez Gene)
Chr10 q21 P62813 (UniProt | EBI)
NM_183326 (RefSeq)
chimpanzee GABRA1 462241 (Entrez Gene)
Chr5 XP_001144644 (RefSeq)
rhesus macaque GABRA1 574302 (Entrez Gene)
Chr6 NP_001247861 (RefSeq)
NM_001260932 (RefSeq)
dog LOC489143 489143 (Entrez Gene)
Chr4 XP_546261 (RefSeq)
chicken GABRA1 374214 (Entrez Gene)
Chr13 P19150 (UniProt | EBI)
NM_204318 (RefSeq)
western clawed frog gabra1 100490334 (Entrez Gene)
ChrUN XP_002941682 (RefSeq)
zebrafish gabra1 768183 (Entrez Gene)
Chr21 NP_001070794 (RefSeq)
NM_001077326 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory