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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human VANGL2 HGNC:15511 (HGNC)
57216 (Entrez Gene)
600533 (OMIM)
HGNC homology
Chr1 q23.2 Chr1:160400574-160428678 (+)
neural tube defect
Q9ULK5 (UniProt | EBI)
NM_020335 (RefSeq)
mouse Vangl2 MGI:2135272 (MGI)
93840 (Entrez Gene)
Gene Tree
HGNC homology
Chr1 79.54 cM Chr1:172000960-172028444 (-)
neural tube defect
OTTMUSG00000021582 (VEGA)
OTTMUSP00000024061 (VEGA)
OTTMUST00000051231 (VEGA)
rat Vangl2 289229 (Entrez Gene)
Chr13 q24 P84889 (UniProt | EBI)
NM_001105969 (RefSeq)
chimpanzee VANGL2 745757 (Entrez Gene)
Chr1 XP_016785960 (RefSeq)
cattle VANGL2 520544 (Entrez Gene)
Chr3 NP_001192804 (RefSeq)
NM_001205875 (RefSeq)
chicken VANGL2 426903 (Entrez Gene)
Chr25 XP_015153868 (RefSeq)
zebrafish vangl2 245949 (Entrez Gene)
Chr7 Q8UVJ6 (UniProt | EBI)
NM_153674 (RefSeq)
frog, western clawed vangl2 613073 (Entrez Gene)
Chr8 Q4VBG5 (UniProt | EBI)
NM_001032310 (RefSeq)
macaque, rhesus VANGL2 720239 (Entrez Gene)
Chr1 XP_014969004 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.12
The Jackson Laboratory