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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
6134

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PIGT HGNC:14938 (HGNC)
51604 (Entrez Gene)
610272 (OMIM)
Chr20 q12-q13.12 Chr20:45416067-45426245 (+)
GRCh38
Multiple Congenital Anomalies-Hypotonia-Seizures Syndrome 3; MCAHS3
Paroxysmal Nocturnal Hemoglobinuria 2; PNH2
Q969N2 (UniProt | EBI)
NM_015937 (RefSeq)
mouse Pigt MGI:1926178 (MGI)
78928 (Entrez Gene)
Gene Tree
VISTA-Point
Chr2 85.17 cM Chr2:164497520-164508301 (+)
GRCm38
OTTMUSG00000001092 (VEGA)
OTTMUSP00000001046 (VEGA)
OTTMUST00000002147 (VEGA)
rat Pigt 296360 (Entrez Gene)
Chr3 q42 NP_001100010 (RefSeq)
NM_001106540 (RefSeq)
chimpanzee PIGT 458282 (Entrez Gene)
Chr20 XP_001155968 (RefSeq)
rhesus macaque PIGT 710556 (Entrez Gene)
Chr10 XP_001107801 (RefSeq)
cattle PIGT 504724 (Entrez Gene)
Chr13 NP_001179925 (RefSeq)
NM_001192996 (RefSeq)
dog PIGT 477244 (Entrez Gene)
Chr24 XP_534436 (RefSeq)
chicken PIGT 419179 (Entrez Gene)
Chr20 XP_417358 (RefSeq)
zebrafish pigt 556667 (Entrez Gene)
Chr23 XP_684608 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/12/2014
MGI 5.19
The Jackson Laboratory