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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
6078

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PMPCA HGNC:18667 (HGNC)
23203 (Entrez Gene)
613036 (OMIM)
PMPCA (MyGene.info)
HGNC homology
Chr9 q34.3 Chr9:136410573-136423761 (+)
GRCh38.p7
autosomal recessive spinocerebellar ataxia 2
Q10713 (UniProt | EBI)
NM_015160 (RefSeq)
mouse Pmpca MGI:1918568 (MGI)
66865 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr2 18.88 cM Chr2:26389348-26397121 (+)
GRCm38
66865 (NCBI Gene Model)
Q9DC61 (UniProt | EBI)
NM_173180 (RefSeq)
rat Pmpca 296588 (Entrez Gene)
Chr3 p13 P20069 (UniProt | EBI)
NM_001003673 (RefSeq)
chimpanzee PMPCA 464862 (Entrez Gene)
Chr9 NP_001267399 (RefSeq)
NM_001280470 (RefSeq)
cattle PMPCA 767847 (Entrez Gene)
Chr11 Q0P5M8 (UniProt | EBI)
NM_001076964 (RefSeq)
dog PMPCA 480677 (Entrez Gene)
Chr9 XP_537796 (RefSeq)
chicken PMPCA 417134 (Entrez Gene)
Chr17 NP_001006197 (RefSeq)
NM_001006197 (RefSeq)
zebrafish pmpca 492801 (Entrez Gene)
Chr5 NP_001007443 (RefSeq)
NM_001007442 (RefSeq)
frog, western clawed pmpca 100379912 (Entrez Gene)
Chr2 XP_002935264 (RefSeq)
macaque, rhesus PMPCA 721742 (Entrez Gene)
Chr15 NP_001252632 (RefSeq)
NM_001265703 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
06/11/2019
MGI 6.14
The Jackson Laboratory