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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
5857

 
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PABPC5 HGNC:13629 (HGNC)
140886 (Entrez Gene)
300407 (OMIM)
HGNC homology
ChrX q21.31 ChrX:91434598-91438584 (+)
GRCh38.p7
Q96DU9 (UniProt | EBI)
NM_080832 (RefSeq)
mouse Pabpc5 MGI:2136401 (MGI)
93728 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
ChrX 49.58 cM ChrX:119927196-119930165 (+)
GRCm38
93728 (NCBI Gene Model)
NP_444344 (RefSeq)
NM_053114 (RefSeq)
rat Pabpc5 688518 (Entrez Gene)
ChrX NP_001103836 (RefSeq)
NM_001110366 (RefSeq)
chimpanzee PABPC5 465742 (Entrez Gene)
ChrX P60049 (UniProt | EBI)
NM_001071801 (RefSeq)
cattle PABPC5 511286 (Entrez Gene)
ChrX NP_001179218 (RefSeq)
NM_001192289 (RefSeq)
dog PABPC5 492002 (Entrez Gene)
ChrX XP_005641602 (RefSeq)
macaque, rhesus PABPC5 696409 (Entrez Gene)
ChrX Q7JGR2 (UniProt | EBI)
NM_001044728 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
02/18/2020
MGI 6.14
The Jackson Laboratory