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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
578

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CACNA1D HGNC:1391 (HGNC)
776 (Entrez Gene)
114206 (OMIM)
Chr3 p14.3 Chr3:53495049-53813152 (+)
GRCh38
Primary Aldosteronism, Seizures, and Neurologic Abnormalities; PASNA
Sinoatrial Node Dysfunction and Deafness; SANDD
Q01668 (UniProt | EBI)
NM_000720 (RefSeq)
mouse Cacna1d MGI:88293 (MGI)
12289 (Entrez Gene)
Gene Tree
VISTA-Point
Chr14 18.43 cM Chr14:30039949-30491156 (-)
GRCm38
ENSMUSG00000015968 (Ensembl Gene Model)
ENSMUSP00000107869 (Ensembl)
ENSMUST00000112250 (Ensembl)
rat Cacna1d 29716 (Entrez Gene)
Chr16 p16 P27732 (UniProt | EBI)
NM_017298 (RefSeq)
chimpanzee CACNA1D 460447 (Entrez Gene)
Chr3 XP_001173076 (RefSeq)
rhesus macaque CACNA1D 693924 (Entrez Gene)
Chr2 XP_002802833 (RefSeq)
cattle CACNA1D 408013 (Entrez Gene)
Chr22 NP_001179954 (RefSeq)
NM_001193025 (RefSeq)
dog CACNA1D 484724 (Entrez Gene)
Chr20 XP_849431 (RefSeq)
chicken CACNA1D 395895 (Entrez Gene)
Chr12 O73700 (UniProt | EBI)
NM_205034 (RefSeq)
zebrafish cacna1da 403310 (Entrez Gene)
Chr11 NP_982351 (RefSeq)
NM_203484 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/26/2014
MGI 5.19
The Jackson Laboratory