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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
57083

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SLC39A5 HGNC:20502 (HGNC)
283375 (Entrez Gene)
608730 (OMIM)
HGNC homology
Chr12 q13.3 Chr12:56230036-56237846 (+)
GRCh38.p7
myopia
Q6ZMH5 (UniProt | EBI)
NM_001135195 (RefSeq)
mouse Slc39a5 MGI:1919336 (MGI)
72002 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr10 76.55 cM Chr10:128395931-128401229 (-)
GRCm38
ENSMUSG00000039878 (Ensembl Gene Model)
ENSMUSP00000037753 (Ensembl)
ENSMUST00000042666 (Ensembl)
rat Slc39a5 362812 (Entrez Gene)
Chr7 q11 NP_001102198 (RefSeq)
NM_001108728 (RefSeq)
chimpanzee SLC39A5 451991 (Entrez Gene)
Chr12 XP_509141 (RefSeq)
cattle SLC39A5 511782 (Entrez Gene)
Chr5 NP_001030274 (RefSeq)
NM_001035102 (RefSeq)
dog SLC39A5 481108 (Entrez Gene)
Chr10 XP_022280581 (RefSeq)
macaque, rhesus SLC39A5 712131 (Entrez Gene)
Chr11 XP_015007474 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
05/14/2019
MGI 6.14
The Jackson Laboratory