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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
56994

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SLC52A2 HGNC:30224 (HGNC)
79581 (Entrez Gene)
607882 (OMIM)
Chr8 q24.3 Chr8:144358557-144361286 (+)
GRCh38
Brown-Vialetto-Van Laere Syndrome 2; BVVLS2
Q9HAB3 (UniProt | EBI)
NM_024531 (RefSeq)
mouse Slc52a2 MGI:1289288 (MGI)
52710 (Entrez Gene)
Gene Tree
VISTA-Point
Chr15 36.04 cM Chr15:76538943-76542130 (+)
GRCm38
52710 (NCBI Gene Model)
Q9D8F3 (UniProt | EBI)
NM_029643 (RefSeq)
rat Slc52a2 362942 (Entrez Gene)
Chr7 q34 B5MEV3 (UniProt | EBI)
NM_001109670 (RefSeq)
chimpanzee GPR172A 464461 (Entrez Gene)
Chr8 XP_001157003 (RefSeq)
rhesus macaque GPR172A 701712 (Entrez Gene)
Chr8 XP_001090939 (RefSeq)
cattle GPR172A 527884 (Entrez Gene)
Chr14 NP_001069369 (RefSeq)
NM_001075901 (RefSeq)
dog SLC52A1 475125 (Entrez Gene)
Chr13 XP_532355 (RefSeq)
western clawed frog slc52a1 493299 (Entrez Gene)
ChrUN NP_001008671 (RefSeq)
NM_001008671 (RefSeq)
zebrafish slc52a2 323832 (Entrez Gene)
Chr19 NP_955950 (RefSeq)
NM_199656 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory