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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
56943

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SMOC1 HGNC:20318 (HGNC)
64093 (Entrez Gene)
608488 (OMIM)
Chr14 q24.2 Chr14:69879388-70032366 (+)
GRCh38
Microphthalmia with Limb Anomalies
Q9H4F8 (UniProt | EBI)
NM_022137 (RefSeq)
mouse Smoc1 MGI:1929878 (MGI)
64075 (Entrez Gene)
Gene Tree
VISTA-Point
Chr12 37.28 cM Chr12:81026808-81186414 (+)
GRCm38
Microphthalmia with Limb Anomalies
OTTMUSG00000033861 (VEGA)
OTTMUSP00000046098 (VEGA)
OTTMUST00000085342 (VEGA)
rat Smoc1 314280 (Entrez Gene)
Chr6 q24 NP_001002835 (RefSeq)
NM_001002835 (RefSeq)
chimpanzee SMOC1 453002 (Entrez Gene)
Chr14 XP_510036 (RefSeq)
rhesus macaque LOC712994 712994 (Entrez Gene)
Chr7 XP_001110348 (RefSeq)
cattle SMOC1 508379 (Entrez Gene)
Chr10 NP_001073239 (RefSeq)
NM_001079771 (RefSeq)
dog SMOC1 480373 (Entrez Gene)
Chr8 XP_005623640 (RefSeq)
chicken SMOC1 768688 (Entrez Gene)
Chr5 XP_001231761 (RefSeq)
zebrafish smoc1 100529120 (Entrez Gene)
Chr17 NP_001188322 (RefSeq)
NM_001201393 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/12/2014
MGI 5.19
The Jackson Laboratory