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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
569

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human BCKDHA HGNC:986 (HGNC)
593 (Entrez Gene)
608348 (OMIM)
BCKDHA (MyGene.info)
HGNC homology
Chr19 q13.2 Chr19:41397789-41425005 (+)
GRCh38.p7
maple syrup urine disease
P12694 (UniProt | EBI)
NM_001164783 (RefSeq)
mouse Bckdha MGI:107701 (MGI)
12039 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr7 13.94 cM Chr7:25629852-25658782 (-)
GRCm38
12039 (NCBI Gene Model)
P50136 (UniProt | EBI)
NM_007533 (RefSeq)
rat Bckdha 25244 (Entrez Gene)
Chr1 q21 P11960 (UniProt | EBI)
NM_012782 (RefSeq)
chimpanzee BCKDHA 468889 (Entrez Gene)
Chr19 A5A6H9 (UniProt | EBI)
NM_001098564 (RefSeq)
cattle BCKDHA 282149 (Entrez Gene)
Chr18 P11178 (UniProt | EBI)
NM_174506 (RefSeq)
dog BCKDHA 484488 (Entrez Gene)
Chr1 XP_866392 (RefSeq)
zebrafish bckdha 554124 (Entrez Gene)
Chr18 NP_001019590 (RefSeq)
NM_001024419 (RefSeq)
macaque, rhesus LOC704978 704978 (Entrez Gene)
Chr19 XP_028698633 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
11/12/2019
MGI 6.14
The Jackson Laboratory