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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
56773

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human RAB39A HGNC:16521 (HGNC)
54734 (Entrez Gene)
Chr11 q22.3 Chr11:107928551-107963482 (+)
GRCh38
Q14964 (UniProt | EBI)
NM_017516 (RefSeq)
mouse Rab39 MGI:2442855 (MGI)
270160 (Entrez Gene)
Gene Tree
VISTA-Point
Chr9 29.12 cM Chr9:53684110-53706232 (-)
GRCm38
OTTMUSG00000030703 (VEGA)
OTTMUSP00000039946 (VEGA)
OTTMUST00000076017 (VEGA)
rat Rab39a 315668 (Entrez Gene)
Chr8 q24 NP_001101618 (RefSeq)
NM_001108148 (RefSeq)
chimpanzee RAB39A 736541 (Entrez Gene)
Chr11 XP_001136512 (RefSeq)
rhesus macaque RAB39 707451 (Entrez Gene)
Chr14 XP_001103335 (RefSeq)
cattle RAB39 541114 (Entrez Gene)
Chr15 NP_001179759 (RefSeq)
NM_001192830 (RefSeq)
dog RAB39 611576 (Entrez Gene)
Chr5 XP_005619887 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory