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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human ATP2C1 HGNC:13211 (HGNC)
27032 (Entrez Gene)
604384 (OMIM)
ATP2C1 (MyGene.info)
HGNC homology
Chr3 q22.1 Chr3:130850500-131016712 (+)
Hailey-Hailey disease
P98194 (UniProt | EBI)
NM_001199179 (RefSeq)
mouse Atp2c1 MGI:1889008 (MGI)
235574 (Entrez Gene)
Gene Tree
HGNC homology
Chr9 56.61 cM Chr9:105403539-105527319 (-)
OTTMUSG00000042223 (VEGA)
OTTMUSP00000061947 (VEGA)
OTTMUST00000110891 (VEGA)
rat Atp2c1 170699 (Entrez Gene)
Chr8 q32 Q64566 (UniProt | EBI)
NM_131907 (RefSeq)
chimpanzee ATP2C1 460694 (Entrez Gene)
Chr3 XP_001145322 (RefSeq)
cattle ATP2C1 327663 (Entrez Gene)
Chr1 P57709 (UniProt | EBI)
NM_175785 (RefSeq)
dog ATP2C1 477066 (Entrez Gene)
Chr23 XP_022264329 (RefSeq)
chicken ATP2C1 428450 (Entrez Gene)
Chr2 XP_015137245 (RefSeq)
zebrafish atp2c1 559574 (Entrez Gene)
Chr16 XP_003200287 (RefSeq)
frog, western clawed atp2c1 100487845 (Entrez Gene)
Chr6 XP_017950481 (RefSeq)
macaque, rhesus ATP2C1 719281 (Entrez Gene)
Chr2 NP_001252952 (RefSeq)
NM_001266023 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.12
The Jackson Laboratory