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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
56672

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human ATP2C1 HGNC:13211 (HGNC)
27032 (Entrez Gene)
604384 (OMIM)
Chr3 q22.1 Chr3:130850483-131016712 (+)
GRCh38
Benign Chronic Pemphigus; BCPM
P98194 (UniProt | EBI)
NM_001001485 (RefSeq)
mouse Atp2c1 MGI:1889008 (MGI)
235574 (Entrez Gene)
Gene Tree
VISTA-Point
Chr9 56.61 cM Chr9:105403539-105521257 (-)
GRCm38
OTTMUSG00000042223 (VEGA)
OTTMUSP00000061947 (VEGA)
OTTMUST00000110891 (VEGA)
rat Atp2c1 170699 (Entrez Gene)
Chr8 q32 Q64566 (UniProt | EBI)
NM_131907 (RefSeq)
chimpanzee ATP2C1 460694 (Entrez Gene)
Chr3 XP_001145322 (RefSeq)
rhesus macaque ATP2C1 719281 (Entrez Gene)
Chr2 NP_001252952 (RefSeq)
NM_001266023 (RefSeq)
cattle ATP2C1 327663 (Entrez Gene)
Chr1 P57709 (UniProt | EBI)
NM_175785 (RefSeq)
dog ATP2C1 477066 (Entrez Gene)
Chr23 XP_534262 (RefSeq)
chicken ATP2C1 428450 (Entrez Gene)
Chr2 XP_426010 (RefSeq)
zebrafish atp2c1 559574 (Entrez Gene)
Chr16 XP_003200287 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/12/2014
MGI 5.19
The Jackson Laboratory