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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
56603

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SLCO1A2 HGNC:10956 (HGNC)
6579 (Entrez Gene)
602883 (OMIM)
Chr12 p12 Chr12:21264600-21395437 (-)
GRCh38
P46721 (UniProt | EBI)
NM_021094 (RefSeq)
mouse Slco1a5 MGI:1351865 (MGI)
108096 (Entrez Gene)
Gene Tree
VISTA-Point
Chr6 73.69 cM Chr6:142234227-142322981 (-)
GRCm38
OTTMUSG00000024218 (VEGA)
OTTMUSP00000062819 (VEGA)
OTTMUST00000059262 (VEGA)
rat Slco1a5 80900 (Entrez Gene)
Chr4 q44 O88397 (UniProt | EBI)
NM_030838 (RefSeq)
chimpanzee SLCO1A2 473385 (Entrez Gene)
Chr12 XP_001151598 (RefSeq)
rhesus macaque SLCO1A2 705434 (Entrez Gene)
Chr11 NP_001248640 (RefSeq)
NM_001261711 (RefSeq)
cattle SLCO1A2 282472 (Entrez Gene)
Chr5 NP_777079 (RefSeq)
NM_174654 (RefSeq)
dog SLCO1A2 403520 (Entrez Gene)
Chr27 XP_852839 (RefSeq)
chicken SLCO1A2 418190 (Entrez Gene)
Chr1 XP_416421 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory