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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
56563

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human RAPGEF5 HGNC:16862 (HGNC)
9771 (Entrez Gene)
609527 (OMIM)
RAPGEF5 (MyGene.info)
HGNC homology
Chr7 p15.3 Chr7:22118290-22357133 (-)
GRCh38.p7
Q92565 (UniProt | EBI)
NM_001367602 (RefSeq)
mouse Rapgef5 MGI:2444365 (MGI)
217944 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr12 63.06 cM Chr12:117516479-117759737 (+)
GRCm38
217944 (NCBI Gene Model)
Q8C0Q9 (UniProt | EBI)
NM_175930 (RefSeq)
chimpanzee RAPGEF5 463284 (Entrez Gene)
Chr7 XP_024213534 (RefSeq)
cattle RAPGEF5 519566 (Entrez Gene)
Chr4 XP_010802412 (RefSeq)
dog RAPGEF5 100855786 (Entrez Gene)
Chr14 XP_005628673 (RefSeq)
chicken RAPGEF5 100857462 (Entrez Gene)
Chr2 XP_015137341 (RefSeq)
zebrafish rapgef5a 100331732 (Entrez Gene)
Chr19 XP_002665506 (RefSeq)
frog, western clawed rapgef5 100494102 (Entrez Gene)
Chr6 XP_017950421 (RefSeq)
macaque, rhesus RAPGEF5 711698 (Entrez Gene)
Chr3 NP_001181087 (RefSeq)
NM_001194158 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory