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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
56495

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human LDHA HGNC:6535 (HGNC)
3939 (Entrez Gene)
150000 (OMIM)
HGNC homology
Chr11 p15.4 Chr11:18394389-18408218 (+)
GRCh38.p2
Glycogen Storage Disease XI; GSD11
P00338 (UniProt | EBI)
NM_001165416 (RefSeq)
mouse Ldha MGI:96759 (MGI)
16828 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr7 30.6 cM Chr7:46841475-46855627 (+)
GRCm38
OTTMUSG00000016500 (VEGA)
OTTMUSP00000017774 (VEGA)
OTTMUST00000039849 (VEGA)
chimpanzee LDHA 451063 (Entrez Gene)
Chr11 Q5R1W9 (UniProt | EBI)
NM_001034096 (RefSeq)
rhesus macaque LOC696854 696854 (Entrez Gene)
Chr17 XP_014976735 (RefSeq)
cattle LDHA 281274 (Entrez Gene)
Chr29 qter P19858 (UniProt | EBI)
NM_174099 (RefSeq)
dog LOC476882 476882 (Entrez Gene)
Chr21 XP_865353 (RefSeq)
chicken LDHA 396221 (Entrez Gene)
Chr5 P00340 (UniProt | EBI)
NM_205284 (RefSeq)
zebrafish ldha 30496 (Entrez Gene)
Chr25 Q9PVK5 (UniProt | EBI)
NM_131246 (RefSeq)
frog, western clawed ldha 394758 (Entrez Gene)
Chr7 NP_989153 (RefSeq)
NM_203822 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/20/2016
MGI 6.05
The Jackson Laboratory