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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
56358

 
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human LETM2 HGNC:14648 (HGNC)
137994 (Entrez Gene)
HGNC homology
Chr8 p11.23 Chr8:38382505-38409527 (+)
GRCh38.p7
Q2VYF4 (UniProt | EBI)
NM_001286821 (RefSeq)
mouse Letm2 MGI:2444979 (MGI)
270035 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr8 14.17 cM Chr8:25578490-25597582 (-)
GRCm38
ENSMUSG00000037363 (Ensembl Gene Model)
ENSMUSP00000078160 (Ensembl)
ENSMUST00000079160 (Ensembl)
rat Letm2 361169 (Entrez Gene)
Chr16 q12.4 Q5PQQ5 (UniProt | EBI)
NM_001012158 (RefSeq)
chimpanzee LETM2 464121 (Entrez Gene)
Chr8 NP_001267453 (RefSeq)
NM_001280524 (RefSeq)
cattle LETM2 783086 (Entrez Gene)
Chr27 XP_010818650 (RefSeq)
dog LETM2 475583 (Entrez Gene)
Chr16 XP_022259759 (RefSeq)
chicken LETM2 426779 (Entrez Gene)
Chr22 XP_024998672 (RefSeq)
zebrafish letm2 100006201 (Entrez Gene)
Chr10 XP_001339387 (RefSeq)
frog, western clawed letm2 549555 (Entrez Gene)
Chr3 Q28DA8 (UniProt | EBI)
NM_001016801 (RefSeq)
macaque, rhesus LETM2 100427727 (Entrez Gene)
Chr8 XP_028708410 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
06/04/2019
MGI 6.14
The Jackson Laboratory