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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CHMP1A HGNC:8740 (HGNC)
5119 (Entrez Gene)
164010 (OMIM)
CHMP1A (MyGene.info)
HGNC homology
Chr16 q24.3 Chr16:89644431-89657785 (-)
pontocerebellar hypoplasia type 8
Q9HD42 (UniProt | EBI)
NM_002768 (RefSeq)
mouse Chmp1a MGI:1920159 (MGI)
234852 (Entrez Gene)
Gene Tree
HGNC homology
Chr8 72.08 cM Chr8:123204264-123212763 (-)
OTTMUSG00000036037 (VEGA)
OTTMUSP00000051142 (VEGA)
OTTMUST00000092503 (VEGA)
rat Chmp1a 365024 (Entrez Gene)
Chr19 q12 NP_001076782 (RefSeq)
NM_001083313 (RefSeq)
cattle CHMP1A 789414 (Entrez Gene)
Chr18 NP_001178189 (RefSeq)
NM_001191260 (RefSeq)
dog CHMP1A 489656 (Entrez Gene)
Chr5 XP_546776 (RefSeq)
chicken CHMP1A 415841 (Entrez Gene)
Chr11 NP_001020611 (RefSeq)
NM_001025440 (RefSeq)
zebrafish chmp1a 393535 (Entrez Gene)
Chr25 Q6PHF0 (UniProt | EBI)
NM_200563 (RefSeq)
frog, western clawed chmp1a 100216166 (Entrez Gene)
Chr4 NP_001135608 (RefSeq)
NM_001142136 (RefSeq)
macaque, rhesus CHMP1A 714304 (Entrez Gene)
Chr20 NP_001078827 (RefSeq)
NM_001085358 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.11
The Jackson Laboratory