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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
56228

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PGAM2 HGNC:8889 (HGNC)
5224 (Entrez Gene)
612931 (OMIM)
Chr7 p13-p12 Chr7:44062727-44065587 (-)
GRCh38
Glycogen Storage Disease X; GSD10
P15259 (UniProt | EBI)
NM_000290 (RefSeq)
mouse Pgam2 MGI:1933118 (MGI)
56012 (Entrez Gene)
Gene Tree
VISTA-Point
Chr11 3.87 cM Chr11:5801640-5803733 (-)
GRCm38
OTTMUSG00000005095 (VEGA)
OTTMUSP00000005308 (VEGA)
OTTMUST00000011391 (VEGA)
rat Pgam2 24959 (Entrez Gene)
Chr14 q21-q22 P16290 (UniProt | EBI)
NM_017328 (RefSeq)
chimpanzee PGAM2 737767 (Entrez Gene)
Chr7 XP_001143059 (RefSeq)
rhesus macaque PGAM2 720615 (Entrez Gene)
Chr3 XP_001116220 (RefSeq)
cattle PGAM2 515067 (Entrez Gene)
Chr22 Q32KV0 (UniProt | EBI)
NM_001038111 (RefSeq)
dog PGAM2 475495 (Entrez Gene)
ChrUN XP_532718 (RefSeq)
western clawed frog pgam2 448157 (Entrez Gene)
ChrUN NP_001005665 (RefSeq)
NM_001005665 (RefSeq)
zebrafish pgam2 572733 (Entrez Gene)
Chr21 NP_957318 (RefSeq)
NM_201024 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory