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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
56113

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human USH1G HGNC:16356 (HGNC)
124590 (Entrez Gene)
607696 (OMIM)
Chr17 q25.1 Chr17:74916084-74923263 (-)
GRCh38
Usher Syndrome, Type IG; USH1G
Q495M9 (UniProt | EBI)
NM_173477 (RefSeq)
mouse Ush1g MGI:2450757 (MGI)
16470 (Entrez Gene)
Gene Tree
VISTA-Point
Chr11 80.84 cM Chr11:115315192-115322041 (-)
GRCm38
Usher Syndrome, Type IG; USH1G
OTTMUSG00000003746 (VEGA)
OTTMUSP00000003981 (VEGA)
OTTMUST00000008174 (VEGA)
rat Ush1g 287819 (Entrez Gene)
Chr10 q32.2-q32.3 NP_001099320 (RefSeq)
NM_001105850 (RefSeq)
chimpanzee USH1G 468326 (Entrez Gene)
Chr17 XP_523715 (RefSeq)
cattle USH1G 531104 (Entrez Gene)
Chr19 NP_001179631 (RefSeq)
NM_001192702 (RefSeq)
dog USH1G 609705 (Entrez Gene)
Chr9 XP_852112 (RefSeq)
chicken USH1G 428684 (Entrez Gene)
Chr18 XP_426242 (RefSeq)
western clawed frog ush1g 100494764 (Entrez Gene)
ChrUN XP_002939606 (RefSeq)
zebrafish ush1g 100330314 (Entrez Gene)
Chr3 XP_002661315 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory