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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SCN3A HGNC:10590 (HGNC)
6328 (Entrez Gene)
182391 (OMIM)
HGNC homology
Chr2 q24 Chr2:165087520-165204088 (-)
Q9NY46 (UniProt | EBI)
NM_001081677 (RefSeq)
mouse Scn3a MGI:98249 (MGI)
20269 (Entrez Gene)
Gene Tree
HGNC homology
Chr2 38.55 cM Chr2:65458263-65567627 (-)
OTTMUSG00000012887 (VEGA)
OTTMUSP00000013849 (VEGA)
OTTMUST00000030910 (VEGA)
rat Scn3a 497770 (Entrez Gene)
Chr3 q21 P08104 (UniProt | EBI)
NM_013119 (RefSeq)
chimpanzee SCN3A 459699 (Entrez Gene)
Chr2B XP_001152748 (RefSeq)
rhesus macaque SCN3A 703178 (Entrez Gene)
Chr12 XP_002798935 (RefSeq)
cattle SCN3A 534223 (Entrez Gene)
Chr2 XP_005202557 (RefSeq)
dog SCN3A 478772 (Entrez Gene)
Chr36 XP_013966325 (RefSeq)
chicken SCN3A 424180 (Entrez Gene)
Chr7 XP_003641650 (RefSeq)
western clawed frog scn1a 100488621 (Entrez Gene)
ChrUN XP_012826732 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.0
The Jackson Laboratory