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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
56005

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SCN3A HGNC:10590 (HGNC)
6328 (Entrez Gene)
182391 (OMIM)
Chr2 q24 Chr2:165087520-165204088 (-)
GRCh38
Q9NY46 (UniProt | EBI)
NM_006922 (RefSeq)
mouse Scn3a MGI:98249 (MGI)
20269 (Entrez Gene)
Gene Tree
VISTA-Point
Chr2 38.55 cM Chr2:65458263-65567627 (-)
GRCm38
OTTMUSG00000012887 (VEGA)
OTTMUSP00000013849 (VEGA)
OTTMUST00000030910 (VEGA)
rat Scn3a 497770 (Entrez Gene)
Chr3 q21 P08104 (UniProt | EBI)
NM_013119 (RefSeq)
chimpanzee SCN3A 459699 (Entrez Gene)
Chr2B XP_001152557 (RefSeq)
rhesus macaque SCN3A 703178 (Entrez Gene)
Chr12 XP_001098987 (RefSeq)
cattle SCN3A 534223 (Entrez Gene)
Chr2 XP_613914 (RefSeq)
dog SCN3A 478772 (Entrez Gene)
Chr36 XP_849168 (RefSeq)
chicken SCN3A 424180 (Entrez Gene)
Chr7 XP_003641650 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/12/2014
MGI 5.19
The Jackson Laboratory