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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
55960

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PPEF1 HGNC:9243 (HGNC)
5475 (Entrez Gene)
300109 (OMIM)
PPEF1 (MyGene.info)
HGNC homology
ChrX p22.13 ChrX:18675909-18827921 (+)
GRCh38.p7
O14829 (UniProt | EBI)
NM_152223 (RefSeq)
mouse Ppef1 MGI:1097157 (MGI)
237178 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
ChrX 73.95 cM ChrX:160623094-160735765 (-)
GRCm38
ENSMUSG00000062168 (Ensembl Gene Model)
ENSMUSP00000071191 (Ensembl)
ENSMUST00000071204 (Ensembl)
rat Ppef1 317498 (Entrez Gene)
ChrX q14 Q3SWT6 (UniProt | EBI)
NM_001034935 (RefSeq)
chimpanzee PPEF1 738868 (Entrez Gene)
ChrX
cattle PPEF1 504618 (Entrez Gene)
ChrX XP_015317263 (RefSeq)
dog PPEF1 100688966 (Entrez Gene)
ChrX XP_022271649 (RefSeq)
chicken PPEF1 427999 (Entrez Gene)
Chr1 XP_015128328 (RefSeq)
zebrafish ppef1 559132 (Entrez Gene)
Chr11 NP_001108202 (RefSeq)
NM_001114730 (RefSeq)
frog, western clawed ppef1 100496625 (Entrez Gene)
Chr2 XP_017947292 (RefSeq)
macaque, rhesus PPEF1 694108 (Entrez Gene)
ChrX XP_028697727 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
10/15/2019
MGI 6.14
The Jackson Laboratory